BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016C03SP1|AL426974
(883 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1409 1615 0.0
>3x_Contig1409
Length = 9404
Score = 1615 bits (806), Expect = 0.0
Identities = 857/883 (97%)
Strand = Plus / Plus
Query: 1 aaatcgagacagatcttctctgatctttgaaaacactattcaacggcaacaaaacggcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 aaatcgagacagatcttctctgatctttgaaaacactattcaacggcaacaaaacggcaa 447
Query: 61 atattttaaatacggtgggtttccaacgtttgtgtattgagttgtgacttgtaagaccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 atattttaaatacggtgggtttccaacgtttgtgtattgagttgtgacttgtaagaccct 507
Query: 121 tttaaacagttcgcctgtaactgtccactgataaacgatccgagtcaataatcacaatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tttaaacagttcgcctgtaactgtccactgataaacgatccgagtcaataatcacaatta 567
Query: 181 aaaaaccaggagaagaaaacagagatcaaaggaaagataataatttatcccttaaccgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 aaaaaccaggagaagaaaacagagatcaaaggaaagataataatttatcccttaaccgaa 627
Query: 241 tgcagaaaatatgattatttcattcaaaggcacttattgaagcgtgttagaccttgttaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 tgcagaaaatatgattatttcattcaaaggcacttattgaagcgtgttagaccttgttaa 687
Query: 301 atacagtaatttcaaggcaaaaaccaaaatgcgtctctatatcatgtcttcatctgcmtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 688 atacagtaatttcaaggcaaaaaccaaaatgcgtctctatatcatgtcttcatctgcatg 747
Query: 361 ttctttttgtataamgcctggntactaaacctttntaaaaccttnaaaaaataataataa 420
|||||||||||||| |||||| |||||||||||| ||||||||| |||||||||||||||
Sbjct: 748 ttctttttgtataaagcctggatactaaacctttataaaaccttaaaaaaataataataa 807
Query: 421 agrttccacatcccaatagtcccaacaaaaaaacaagcaacaagaragasaatgaraaat 480
|| |||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||
Sbjct: 808 agattccacatcccaatagtcccaacaaaaaaacaagcaacaagaaagaaaatgaaaaat 867
Query: 481 caagttttgctgasatactgccacarctggggtrtgacttccttgagccgtatgtgctgc 540
||||||||||||| ||||||| ||| |||| | |||||||||||| |||||||||||||
Sbjct: 868 caagttttgctgaaatactgcaacaactggaatatgacttccttgaaccgtatgtgctgc 927
Query: 541 acttcataagtataattaaacaagaatataacctgcatgtmaaattcgggtcacgtgaaa 600
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 928 acttcataagtataattaaacaagaatataacctgcatgtaaaattcgggtcacgtgaaa 987
Query: 601 cacgtgmcgtaatttttctaccactcgaatgadaatattcttccagcttatatwagcgtt 660
|||||| | ||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 988 cacgtgacccgtattttctaccactcgaatgaaaatattcttccagcttatataagcgtt 1047
Query: 661 gattatcttccgatccccacgctaccttcttagagatttcagcgtgggcaaacacaacgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1048 gattatcttccgatccccacgctaccttcttagagatttcagcgtgggcaaacacaacgg 1107
Query: 721 tcgcagattcccgatcccacattaaagtatgggtcacaaaatggctcagctcttccagcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1108 tcgcagattcccgatcccacattaaagtatgggtcacaaaatggctcagctcttccagcc 1167
Query: 781 cttcccttttctcatcacgctacatgggatgcattaggaaaccggtagctcatagagatt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1168 cttcccttttctcatcacgctacatgggatgcattaggaaaccggtagctcatagagatt 1227
Query: 841 aatgataccatcagctgcgcaatcattcarcaacaccggcttt 883
||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1228 aatgataccatcagctgcgcaatcattcagcaacaccggcttt 1270
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6005
Number of Sequences: 1807
Number of extensions: 6005
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 883
length of database: 10,358,551
effective HSP length: 16
effective length of query: 867
effective length of database: 10,329,639
effective search space: 8955797013
effective search space used: 8955797013
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)